Pandora Report 8.16.15

It looks like the blog isn’t the only place with a lull during the summer. This week was oddly slow for news; maybe it’s an August thing? For our top stories we’ve got ISIS with chemical weapons and, from our neighbor to the north, a disease diagnosing fabric. We’ve even got a few stories you may have missed.

Have a great week!

U.S. Investigating ‘Credible’ Reports that ISIS Used Chemical Weapons

The U.S. is investigating what it believes are credible reports that ISIS fighters used mustard agent against Kurdish Peshmerga fighters in Makhmour in Northern Iraq. ISIS posted about the attack on social media, but American officials have stated they have independent information that left them believing that a chemical weapon was used. A German Ministry of Defense spokesman echoed that they cannot confirm or rule out that a chemical weapons attack occurred. The major question for U.S. officials is to determine if it was mustard gas, and if so, how ISIS came to possess it.

CNN—“Blake Narenda, a spokesperson for the State Department’s Arms Control, Verification and Compliance Bureau, said, “We continue to take these and all allegations of chemical weapons use very seriously. As in previous instances of alleged ISIL use of chemicals as weapons, we are aware of the reports and are seeking additional information. We continue to monitor these reports closely, and would further stress that use of any chemicals or biological material as a weapon is completely inconsistent with international standards and norms regarding such capabilities.”

CNN has previously reported claims from monitoring groups that ISIS used chlorine weapons against Kurdish forces.”

Halifax Scientist Develops High-Tech Fabric that Helps Diagnose Diseases

Yes, you read that right. Christa Brosseau, an analytical chemist at Saint Mary’s University in Halifax, Nova Scotia, is working on the development of a chemical sensor which can be built into fabric and can detect diseases like tuberculosis, malaria, and HIV/AIDS.  How is this even possible? First the scientists make Nanoparticles, then aggregate those particles which ends up as a silver Nanoparticle paste. That paste can be placed on a fabric chip and it then ready to use. The fabric chip interacts with bodily fluids like sweat, saliva, or urine, and is then scanned for information.

CTV—“The technology picks up disease biomarkers and the scientists are able to get results in approximately 30 seconds, by using hand held units, the size of a TV remote control, to scan the samples. The size of the units makes them convenient for working in the field.

Eventually, the scientists hope to see the technology deployed in exercise headbands, or cloth inserts in infant diapers, to better monitor the state of health.”

Stories You May Have Missed

Image Credit: U.S. Army

New Bat Flu Found

By Jonathon Marioneaux

Halloween is right around the corner, so we continue our coverage of one of the most notable creatures of the season: bats. Previously we covered vampire bats and their role in spreading rabies to humans and livestock in South America.  Considering how bats appear to be vectors for both Ebola and rabies this made left me wondering what other viruses bats carry.

Many animals carry some sort of virus that belong to the Orthomyxoviridae family which is broken into three classes A, B, and C.  Classes B and C primarily infect humans while class A infects a range of hosts including birds, mammals, and reptiles. However, no Orthomyxoviridae virus has been found in bats, or so we thought.  In October researchers from Maryland and Kanas discovered a new flu virus that can be transmitted between bats and in doing so discovered a new lineage of the Orthomyxoviridae family and a potential new pandemic flu.

Influenza is a negative sense RNA virus consisting of 7-8 segments allowing it to recombine during infection and create new combinations of RNA segments.  Multiple types of influenza can infect a host cell simultaneously allowing strains of flu from different hosts to recombine in novel ways.  This ability to be infected with different types of influenza viruses is why there are new outbreaks of the flu every year and why the virus has the potential to become a global pandemic if the correct reassortment happens.


Bats carry many diseases such as Coronaviruses, Filoviruses, and Henipaviruses, but as stated earlier, no Orthomyxoviridae have been previously found.  While trying to sequence genomes the researchers found influenza-like RNA sequences in tissue cultures.  However, when these sequences were introduced into cell cultures they did not replicate efficiently.  The researchers then synthetically altered the surface protein structure and re-infected cell and animal models.  The virus reproduced efficiently in the cell and mice models with high mortality among the mice; thus showing that the virus can reproduce in traditional flu hosts. The researchers indicated that the bat virus does not have the same surface proteins that influenza A and B contain.  This lack of ability to infect the same cells shows high cell specificity that results in a limitation of the cell types that influenza A and bat influenza can infect.  Finally, the genetic differences that are seen in the bat influenza virus indicate that they are a distant relative of the current influenza types, thus potentially making them a new branch of the Orthomyxoviridae family tree.

The difficulty in growing the bat viruses in traditional cells without modification indicates that the virus does not have the necessary surface proteins to enter cells.  However, after synthetic modification the bat virus was very lethal in host cells and animal models.  This indicates that the bat virus is only distantly related to the influenza A and B types that circulate currently.  Therefore, the risk of reassortment between flu viruses is small and there is a smaller risk of a global pandemic.

In conclusion,  bats harbor many viruses and make great Halloween decorations but they pose little risk for a global pandemic of zombie apocalyptic proportions and are great for the environment.  So, make sure you thank the next bat that you see and we will continue our coverage of our winged friends next week.

Pandora Report 10.11.14

With so many stories being dedicated to Ebola, I was absolutely delighted to see coverage of influenza this week. We’ve also got stories about the proliferation of antibiotic resistant bugs in nursing homes, George Washington as the first father of vaccination, and of course, an Ebola update.

There will be no news round up next week, so I will see you all back here on October 25. Enjoy your weeks and don’t forget your flu shot!

Ebola’s Bad, but Flu’s Worse

With the coverage of the Ebola outbreak in media (and even on this blog) it may have inadvertently caused unreasonable panic in the American populace. The fact of the matter is one person in the U.S. has died from Ebola. Every year, according to the CDC, more than “226,000 Americans are hospitalized with flu and approximately 36,000 die from flu-related complications.” News outlets this week quietly reported on flu vs. Ebola and offered points of clarification about both diseases as well as tips for staying well. These include getting your flu vaccination, washing hands frequently especially after using the restroom and before eating or preparing food, and avoiding touching eyes, nose, or mouth to limit spread of germs.

Times Union—“‘The reality is there are vaccinations and treatment options available for the flu that are not available for Ebola. The reason for concern is there is no magic bullet to stop Ebola,’ said [Dr.Edward] Waltz [director of the Center for Public Health Preparedness at the University at Albany]. ‘I think the most important message to get is, take action on the things that you can control. We have so many things that affect our health that we can’t control, get yourself a vaccination if it is available.’”

Medical Superbugs: Antibiotic-resistant Bacteria Carried by More than a Third of Nursing Home Residents

A study out of Melbourne, Australia, reported that more than 1/3 of nursing home residents tested were carriers of antibiotic-resistant bacteria. And this problem isn’t just plaguing other countries. In fact, a report from the U.S. Centers for Medicare and Medicaid Services found rising rates of pneumonia, urinary tract infections, viral hepatitis and MRSA. The Australian study also found that more than half of the tested residents had received antibiotics within three months of being tested. Overuse of antibiotics can lead to higher rates of superbugs or other infections like C. difficile, which can be lethal in seniors. (On a personal note, my grandmother recently died from complications after a C. diff infection.)

ABC—“‘(Our concern is) that nursing homes are acting as a kind of reservoir, if you like, of antibiotic-resistant bacteria. We know these residents have fairly frequent movement in and out of acute care institutions, and this obviously poses risks to acute care hospitals for transmission. It could be transmitted to other patients in an acute care hospital, if the resident actually has an infection they might be infected with a more resistant bacteria – they’re the two main concerns.’”

George Washington, the First Vaxxer

This week, the Daily Beast provided an excerpt from historian Tom Shachtman’s new book, Gentlemen Scientists and Revolutionaries: The Founding Fathers in the Age of Enlightenment. At a time where people are choosing to forgo vaccinations and alarm over Ebola grows worldwide, it is amazing to see George Washington—Virginian, 1st President, Founding Father, serious boss, and old fashioned speller—decide that army immunization would not only save the lives of soldiers, but indirectly safeguard a young American nation. Shachtman recounts a February 1777 letter from Washington to John Hancock, President of the Continental Congress.

The Daily Beast—“‘The small pox has made such Head in every Quarter that I find it impossible to keep it from spreading thro’ the whole Army in the natural way. I have therefore determined, not only to innoculate all the Troops now here, that have not had it, but shall order Docr Shippen to innoculate the Recruits as fast as they come in to Philadelphia. They will lose no time, because they will go thro’ the disorder while their cloathing Arms and accoutrements are getting ready.’”

This Week in Ebola

The first (and only) patient with a domestically diagnosed case of Ebola died this week in Dallas, TX amid calls, and responses, about tightening airport screening and travel restrictions. Six major American international airports have enhanced screening for travellers arriving from West Africa while airline workers at LaGuardia have protested over what they say are inadequate protections from potential Ebola exposure. In other air travel related news, a passenger was removed from a US Airways flight after joking about being infected with Ebola and a sick passenger traveling from West Africa to Newark airport does not have Ebola. A nurse in Spain did get infected with the virus this week, as other European nations fear further spread inside their countries. American Ebola survivor Dr. Rick Sacra was hospitalized and treated this week for pneumonia and another American Ebola survivor, Dr. Kent Brantly donated his blood in order to help treat an infected NBC cameraman.

Evidently one fifth of Americans, according to a Gallup poll, are concerned about getting Ebola which is causing the ‘apocalypse business’ to boom. Meanwhile, West Africans living in the U.S. are taking action to spread information within their communities about the virus and there was a wonderful piece on how Nigeria beat Ebola. Finally, CDC director Dr. Tom Frieden spoke this week on how this Ebola outbreak is like the AIDS epidemic and why he doesn’t support a travel ban to combat the outbreak. All of this comes at a point in time where the number of deaths from the outbreak has reached over 4000.

Stories You May Have Missed

Image Credit: Immunize.ca

Ailments and Age Groups: What Makes Illness Age Dependent?

By Chris Healey

An uncommon and underreported virus has affected children in states across America. State health departments around the country have reported an unusual number of enterovirus D68 infections this season. Many hospitalizations – but no deaths – have been reported.

Enterovirus D68 was first isolated in California in 1962 from four children with pneumonia. Enteroviruses generally inflict a wide range of symptoms, but species D68 almost exclusively affects the respiratory system. D68 also shares genetic similarity with rhinoviruses—the viral species responsible for the common cold.

Past outbreaks of enterovirus D68 have occurred mostly in children. Although health experts aren’t sure why children are vulnerable to the illness relative to other age groups, the answer probably lies with the immune system. Age effects immune function. In prepubescence, the immune system is immature and naïve toward host threats. In old age, deterioration of essential immune system tissues – such as bone marrow – contribute to immune system decline.

Due to dampened immunity in childhood and late adulthood, illness is more common – and more often fatal. However, one historical exception stands out: the Spanish Flu of 1918.

Flu subtypes undergo antigenic drift, a process resulting in subtle genetic changes prompting the need for new flu vaccines each year. However, the Spanish Flu of 1918 was a result of dramatic genetic change called antigenic shift. The result was a new subtype to which the population had no immunity.

Many health experts consider the Spanish Flu of 1918 the worst pandemic in history – with at least 40 million deaths worldwide. By comparison, the Black Death was responsible for 25 million deaths. The Spanish Flu pandemic was caused by a direct transmission of influenza subtype H1N1 from bird to human.

The Spanish Flu of 1918 was unique because of its W-shaped mortality curve. When Spanish Flu mortality among age groups are plotted on an x-y axis – with x as age groups and y as specific death rate – the graph shows there were more deaths among the 18-to-40-age group than any other. That trend is unusual – 18-to-40 age groups typically have the highest immune function of all age groups, providing the greatest defense against pathogens.
For the Spanish Flu, the immune system actually worked against the host. The immune system reacted so violently to the novel Spanish Flu that it damaged the host more than the flu infection itself, leaving those with the strongest immune systems – ages 18-to-40 – most grievously affected.

 

Image Credit: Fox6Now

Pandora Report 6.14.14

Don’t forget, early registration for the Summer Program in International Security ends Sunday, June 15. 

Register today to save $200-$300!


News is a little light this week but highlights include antibiotic resistance in the grocery store and the reconstruction of the 1918 flu virus. There will be no news round up next week, so I’ll meet you back here in two weeks!

Bacteria Found in Squid Raises Concern About Spread of Antibiotic Resistance

For the first time, researchers in Canada have discovered one of the deadliest kinds of antibiotic-resistant bacteria in a food product. The organism was found in a package of imported frozen squid, which was purchased at a store in Saskatoon, Saskatchewan. The discovery of the bacteria in food is troubling because it provides an additional method of human acquisition of antibiotic resistance.

The Washington Post—“The bacterium found in the squid is a common environmental organism, present in dirt and water. But in this case, scientists found that it had a gene that made it resistant to antibiotics that are considered the last line of defense. Bacteria that have this capability are dangerous because if they are in a person’s body, they can share that gene or enzyme with other bacteria. And that makes those other bacteria also resistant to these last-resort antibiotics, known as carbapenems.”

A Flu Virus That Killed Millions in 1918 Has Now Been Recreated

Yoshihiro Kawaoka is in the news again after his research team at the University of Wisconsin-Madison, reverse engineered an influenza virus from a similar one found in birds, combining several strains to create one nearly identical to the virus that caused the 1918 outbreak. The team then mutated the genes to make it airborne in order to study how it spreads between animals. Kawaoka is not new to this sort of research—which some view as controversial and dangerous—he engineered a strain of H5N1 to pass airborne from ferret to ferret in 2011.

Vice News—“The research was funded by the National Institute of Health as a way to find out more about similar virus’ and their transmissibility from animals to humans. It was done in a lab that complied with full safety and security regulations, said Carole Heilman, director of the Division of Microbiology and Infectious Diseases, at National Institute of Allergy and Infectious Diseases (NIAD), a division of NIH. ‘It was an question of risk versus benefit,’ Heilman told VICE News. ‘We determined that the risk benefit ratio was adequate if we had this type of safety regulations.’”

 

Image Credit: Wikimedia Commons

Image of the Day: Camp Funston

Camp Funston

 

This photo depicts an influenza ward at Camp Funston in Kansas during the 1918 Influenza Pandemic. This flu outbreak occurred between 1918 and 1920 and was one of the most deadly in history, infecting approximately 500 million people and killing 3-5% of the world population (50-100 million.)

That’s killed 3-5% of the entire world–not just infected 3-5% of the world!

Many historical resources cover this worldwise pandemic, also known as “Spanish Flu”, its effects, it causes, and the lasting legacy. Two include flu.gov and John M. Barry’s The Great Influenza.

 

The Pandora Report 2.21.14

Editor’s note: Hello all Pandora Report subscribers! This is unfortunately my last week as author of the Pandora Report. It’s been such a pleasure having the opportunity to write the Pandora Report, and I would like to thank all of you for taking the time to subscribe and read it. I leave you all in the trusty hands of the new Pandora Report team – goodbye, thank you, and remember to stay away from the bats.

Highlights include PEDv, 1918 Spanish Flu, MERS-CoV, and Ebola. Happy Friday!

As deadly pig virus spreads, USDA warns of impact on hog supply

Porcine epidemic diarrhea virus (PEDv)has spread to a further two states, with Montana and Idaho reporting cases for the first time. The virus, which has a fatality rate approaching 100% in piglets, has swept across the country, with 3,528 cases in 25 states. Contaminated feed was recently put forth as a potential source of the virus’ spread. Before you start autoclaving your pork products, remember that the virus poses no threat to humans.

Chicago Tribune – “PEDv causes diarrhea, vomiting and severe dehydration in pigs. Research by the U.S. hog industry determined it is spread orally through infected pig manure, and can be carried by trucks, boots, clothes and water. But feed containing porcine by-products, including but not limited to plasma, recently came into focus as a means of transmission. The Canadian Food Inspection Agency (CFIA) found the virus in samples of U.S.-origin plasma from a third-party manufacturer for Grand Valley Fortifiers, a livestock feed company based in the province of Ontario. The company recalled the feed.”

Study revives bird origin for 1918 flu pandemic

According to a new study published in Nature, the 1918 (H1N1) Spanish flu virus originated not from reassortment in pigs, but from domestic water and shore birds. This most recent study contradicts finding in a persuasive 2009 study which found the virus to have circulated in humans and pigs for up to 15 years prior to the pandemic. Historical epidemiology is critical to better understanding, and therefore predicting, emerging  pandemic threats.

Nature – “The virus that caused the 1918 influenza pandemic probably sprang from North American domestic and wild birds, not from the mixing of human and swine viruses. A study published today in Nature1 reconstructs the origins of influenza A virus and traces its evolution and flow through different animal hosts over two centuries. ‘The methods we’ve been using for years and years, and which are crucial to figuring out the origins of gene sequences and the timing of those events, are all flawed’, says lead author Michael Worobey, an ecologist and evolutionary biologist at the University of Arizona in Tucson. Worobey and his colleagues analysed more than 80,000 gene sequences from flu viruses isolated from humans, birds, horses, pigs and bats using a model they developed to map evolutionary relationships between viruses from different host species. The branched tree that resulted showed that the genes of the deadly 1918 pandemic virus are of avian origin.”

Saudi Arabia’s MERS Death Toll Reaches 60

The sixtieth MERS-CoV fatality in Saudi Arabia was a 22-year old male with previously existing conditions. The young man was also battling cancer. There have been 182 cases of the virus globally, of which 165 have been in Saudi Arabia. All but nineteen of the fatalities have been in Saudi Arabia. No word yet on whether he had previous contact with camels.

Gulf Business – “The virus, which first appeared in 2012, has affected around 182 people globally and has resulted in 79 deaths till date, according to World Health Organisation (WHO). MERS, a deadly but less transmissible virus than SARS, has symptoms such as coughing, fever and pneumonia. Although the worldwide number of MERS infections is fairly small, the high death rate among confirmed cases and the spread of the virus beyond the Middle East is keeping scientists and public health officials on alert. Cases have been reported in Saudi Arabia, Qatar, Kuwait, Jordan, UAE, Oman and Tunisia as well as in several countries in Europe.”

Man steals phone from Ebola patient, gets infected

As this is my last Pandora Report, it is only appropriate Ebola is mentioned at least once. This story is making the rounds again following it’s use in a promotional AARP blog post (bold move, AARP, bold move). Its moral? Don’t steal things from hospitals. Especially things located in a hospital’s active quarantine zone. Especially things located in a hospital’s active quarantine zone during an Ebola outbreak.

The Daily Monitor (Uganda) – “Security and medical officials in Kibaale District have registered a case in which a man allegedly went in an isolation ward at Kagadi Hospital and stole a cellular phone from one of the Ebola patients…Police detectives began tracking him after he apparently began communicating to his friends using the phone. But as police zeroed in on him, he developed symptoms similar to those of Ebola and sought medication at the hospital…In his confession made to the police, the suspect, now patient, claimed he had visited the isolation ward to give them comfort although he confessed to knowing none in person.”

(image courtesy of NIAID)

The Pandora Report 1.23.14

Highlights include dengue in Texas, H7N9 spiking ahead of the Chinese New Year, renaming the 1918 influenza, and a man selling abrin on the black market. Happy Friday (stay warm)!

Rare Disease Linked to Dengue Virus Caused Texas Woman’s Death
A Texan woman thought to have been infected and died with West Nile Virus has been discovered to have actually succumbed to   dengue. The woman’s case was recently published by the CDC, which warned of the need for effective surveillance. Dengue thankfully remains relatively rare in the US – the woman represented just the third case in nearly a decade.

LiveScience – “The woman died after her dengue infection brought on another condition called hemophagocytic lymphohistiocytosis (HLH), in which white blood cells build up in the skin, spleen and liver, and destroy other blood cells. HLH is most frequently associated with Epstein Barr virus infection, but also has been linked to dengue, according to the researchers, from the Centers for Disease Control and Prevention.”

H7N9: Bird flu cases surge ahead of Chinese New Year
As the Chinese New Year approaches, the number of H7N9 cases has steadily increased, with  73 cases in the last three weeks alone. This is making people very nervous  – Chinese New Year often means millions of people travelling in very close quarters, over long periods of times. However, health officials are careful to point out that influenza case numbers, across strains, increase in the colder months. As long as the virus remains poorly transmitted person-to-person, things are fine.

BBC – “Proffesor John McCauley, the director of a WHO collaborating centre on influenza in London, said: ‘I’ve been worried all the time about H7N9; it’s highly virulent and the case fatality is about one in three, so it poses a threat.’ The range of the virus had also spread, he added, with cases in Guangdong province, further south and east than previously. He said the winter might not be the whole explanation, particularly in southern provinces closer to the equator. ‘It may be seasonal, or an alternative is more poultry exposure in the build-up to Chinese New Year, and more poultry going through the markets. They might need to reconsider closure of the markets’.”

1918 Flu Pandemic That Killed 50 Million Originated in China, Historians Say
The 1918 Spanish influenza, like so many strains of the virus, has apparently suffered for decades under an egregious misnomer. According to a new hypothesis, proposed by historian Mark Humphries, the grandfather of modern H1N1 strains may have originated in China. Humphries published his research in the journal War in History, in it arguing that the importation of almost 100,000 Chinese laborers to support the British and French lines may have introduced the virus to Europe. For those of you wondering, the pandemic strain was dubbed the Spanish flu apparently because Spain was one of the only countries to report on its heavy case numbers during the otherwise heavily censored WWI.

National Geographic – “In the new report, Humphries finds archival evidence that a respiratory illness that struck northern China in November 1917 was identified a year later by Chinese health officials as identical to the Spanish flu. He also found medical records indicating that more than 3,000 of the 25,000 Chinese Labor Corps workers who were transported across Canada en route to Europe starting in 1917 ended up in medical quarantine, many with flu-like symptoms…Writing in the January issue of the journal War in History, Humphries acknowledges that his hypothesis awaits confirmation by viral samples from flu victims. Such evidence would tie the disease’s origin to one location.”

Feds: Fla. man sold deadly toxin to NJ agent
A 19 year old in Florida has been apprehended after selling to toxin abrin to an undercover FBI agent. The deal was agreed upon online, with the FBI agent posing as a buyer on an intermediary cyber black market. The suspect was arrested after directing the FBI agent to two candles filled with the toxin, left in a fast food bag at a rest stop in Florida. A McDonalds bag, for those of you wondering about the culinary preferences of illicit toxin sellers. On a less flippant note, abrin is tremendously potent – while it presents similarly to ricin, it is 75 times more toxic.

The Grand Island Independent – “Prosecutors said Korff negotiated over the Internet with the undercover agent in New Jersey.’He allegedly peddled the poison on a virtual black market of illegal and dangerous good, hidden in the shadow of a secretive computer network favored by cybercriminals,’ said New Jersey U.S. Attorney Paul J. Fishman. Korff received $1,500 over the Internet from the agent and left the toxin hidden in two candles at a rest stop near Fort Myers, Fla., authorities said. Korff was arrested after the candles were found to contain abrin.”

(image:Calvin Teo)

The Pandora Report 7.26.13

Highlights include Saudi Arabia’s hajj travel restrictions, zoonotic adenoviruses, PEDv, studying the 1918 pandemic, and plague in people you know. Happy Friday!

Virus fears, Mecca work downsizes hajj pilgrimage

Saudi Arabian officials, responding to fears over hajj contributing to MERS potential spread, have significantly cut the number of pilgrims allowed to perform the annual pilgrimage to Mecca. Numbers of pilgrims from within Saudi Arabia have been cut by half, and those travelling to Mecca from other countries by one fifth. Officials were quick to stress that the decision was based on “exceptional” circumstances, and may be revised as MERS’ spread is tracked. The decision is an interesting one, given that the WHO’s specially convened MERS committee just last week decided against travel restrictions.

Economic Times – “Fears of an outbreak of the deadly MERS virus in Saudi Arabia and construction in the holy city of Mecca have forced cuts in the numbers of pilgrims permitted to perform this year’s hajj. Millions of Muslims during the annual pilgrimage head to Mecca and Medina, Islam’s two holiest sites, providing a possible means for MERS to spread around the globe as pilgrims who may become infected return to their home countries.”

Adenoviruses May Pose Risk for Monkey-to-Human Leap

Most of the world’s deadliest viruses are zoonotic (ebola, anyone?) When a new virus is determined to spread from animals to humans, it’s therefore not surprising, but it’s often troubling, as humans often have little to no immunity to such bugs. The ongoing outbreaks of H7N9 and MERS are both recent examples. Now, researchers at the University of San Francisco have determined that a novel adenovirus – identified just four years ago – may be able to cause disease in humans. In a study involving adenovirus C, the researchers were able to trace the virus’ spread from an enclosed Californian baboon colony to the human staff members caring for them.

UCSF – “‘This study raises more concerns about the potential of unknown viruses to spread from animals to humans,’ said Chiu, who is an assistant professor of medicine at UCSF. ‘We still don’t understand the full extent of viruses that exist in the world and their potential to cause outbreaks in human populations.’ Last year, Chiu and colleagues also identified another new adenovirus, named simian adenovirus C, which sickened four of nine captive baboons and killed two of them at a primate facility in 1997. Several staff members at the facility also complained of upper respiratory symptoms at the time of the outbreak. Re-examining the samples many years later, Chiu and his colleagues found antibodies targeted to simian adenovirus C in the human samples.”

Deadly Pig Virus Slips through U.S. Borders

The porcine epidemic diarrhea virus (PEDv) continues to rage in the United States, having now spread to 14 states, including outliers like North Carolina. With the virus’s fatality rates occasionally approaching 100% in piglets, its spread has USDA and the US pork industry both (understandably) very nervous. The virus’ source in the United States remain unknown, and efforts to sequence it have been hampered by a couple things. First, it is notoriously difficult to culture – unsurprisingly, pig viruses tend to grow best in pigs. Second, the restrictions the US had in place to prevent the virus entering the US in the first place are making acquisition of the right lab materials to culture it difficult. With the virus’ apparent preference for cooler temperatures, and Autumn approaching, scientists are racing to determine the source before the outbreak spreads further.

Scientific American –  “‘How this virus got here, that’s the million-dollar question,’ says James Collins, director of the Veterinary Diagnostic Laboratory at the University of Minnesota in St Paul. The pathogen, a type of coronavirus called porcine epidemic diarrhea virus (PEDV), was first identified in the United Kingdom in 1971, and it caused mass epidemics in Europe in the 1970s and 1980s…The virus can spread quickly by a fecal–oral route and infect entire herds. And although adult pigs typically recover, PEDV can kill 80–100% of the piglets it infects. The virus poses no health threat to humans. The US Department of Agriculture (USDA) had tried to keep PEDV and other diseases out of the country by restricting imports of pigs and pork products from certain nations, such as China. But on 10 May, the Veterinary Diagnostic Laboratory at Iowa State University in Ames confirmed that PEDV had infected pigs in Iowa, the leading producer of US pork.”

New Light Shed On Cause of Pandemic Influenza

After using mathematical models to analyze the 20th century’s worst pandemics, the 1918 Spanish flu pandemic.  Researchers have developed three key factors which exacerbated the pandemic’s impact – school openings and closing, temperature fluctuations, and human behavioral changes.

Science Daily – “Dr He and the researchers further applied this model to the reported influenza mortality during the 1918 pandemic in 334 British administrative units and estimate the epidemiological parameters. They have used information criteria to evaluate how well these three factors explain the observed patterns of mortality. The results indicate that all three factors are important, but behavioural responses had the largest effect.”

My Friends Got the Plague, and This New Test Could Have Helped Them

It’s easy to believe that the bacteria and viruses we write about exist only in distance countries or highly secure labs. As the above blog piece illustrates, sometimes all it takes is a vacation to New Mexico. The piece also discusses the importance of science’s ugly stepchild – basic research.

Motherboard (VICE) – “Despite very low incidence and the availability of treatment with modern antibiotics, the plague is still a very deadly illness whose prognosis becomes worse by the minute when it strikes. This technique is useful because it provides a quick way of, at the very least, ruling out the illness, which is so often overlooked. Importantly, the researchers note that their technique would not have been possible without previous basic research, which many consider a lesser priority than corporate-sponsored applied research.”

(image courtesy of Al-Hijr)